Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS12970 | Not Available | Positive | 3086477 - 3087603 | 42548.8 |
| rna degradosome polyphosphate kinase | BvMPK_RS12975 | Not Available | Positive | 3087739 - 3089805 | 79791.8 |
| exopolyphosphatase | BvMPK_RS12980 | Not Available | Positive | 3089807 - 3090721 | 34342.0 |
| m28 family peptidase | BvMPK_RS12985 | Not Available | Positive | 3090864 - 3092411 | 57370.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12990 | Not Available | Positive | 3092607 - 3094141 | 56473.2 |
| f0f1 atp synthase subunit epsilon | BvMPK_RS12995 | Not Available | Positive | 3094150 - 3094404 | 9226.99 |
| hypothetical protein | BvMPK_RS13000 | Not Available | Positive | 3094414 - 3094827 | 16367.0 |
| f0f1 atp synthase subunit a | BvMPK_RS13005 | Not Available | Positive | 3094829 - 3095920 | 40577.2 |
| atp synthase f0 subunit c | BvMPK_RS13010 | Not Available | Positive | 3095952 - 3096206 | 8151.6 |
| f0f1 atp synthase subunit b | BvMPK_RS13015 | Not Available | Positive | 3096217 - 3096717 | 18885.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

