Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtp-binding protein yiha/ysxc | BvMPK_RS12865 | Not Available | Negative | 3066643 - 3067245 | 23034.9 |
| sodium:solute symporter | BvMPK_RS12870 | Not Available | Negative | 3067211 - 3068692 | 55351.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12875 | Not Available | Positive | 3068771 - 3069387 | 22266.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12880 | Not Available | Positive | 3069408 - 3069877 | 17318.6 |
| gnat family n-acetyltransferase | BvMPK_RS12885 | Not Available | Positive | 3069874 - 3070410 | 20476.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12890 | Not Available | Negative | 3070403 - 3070991 | 22150.8 |
| hypothetical protein | BvMPK_RS22075 | Not Available | Positive | 3071047 - 3071244 | 7902.13 |
| Trna-asp | Not Available | Not Available | Positive | 3071222 - 3071295 | Not Available |
| helix-turn-helix transcriptional regulator | BvMPK_RS22080 | Not Available | Negative | 3071697 - 3073146 | 53487.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12915 | Not Available | Negative | 3073643 - 3074067 | 15450.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

