Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | BvMPK_RS12625 | Not Available | Positive | 3006064 - 3006618 | 21477.1 |
| hypothetical protein | BvMPK_RS12630 | Not Available | Positive | 3006667 - 3006951 | 11191.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12635 | Not Available | Positive | 3006986 - 3010184 | 113690.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS12640 | Not Available | Positive | 3010209 - 3012179 | 73830.3 |
| tonb-dependent receptor | BvMPK_RS12645 | Not Available | Positive | 3012650 - 3015808 | 116416.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS12650 | Not Available | Positive | 3015832 - 3017607 | 67561.8 |
| histidine-type phosphatase | BvMPK_RS12655 | Not Available | Positive | 3017622 - 3018902 | 48942.6 |
| uroporphyrinogen decarboxylase family protein | BvMPK_RS12660 | Not Available | Positive | 3019052 - 3020062 | 36532.3 |
| vitamin b12 dependent-methionine synthase activation domain-containing protein | BvMPK_RS12665 | Not Available | Positive | 3020055 - 3020741 | 25457.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22065 | Not Available | Negative | 3020844 - 3021025 | 6509.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

