Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BvMPK_RS12575 | Not Available | Negative | 2984309 - 2984533 | 8547.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12580 | Not Available | Positive | 2984608 - 2987231 | 98752.2 |
| two-component regulator propeller domain-containing protein | BvMPK_RS12585 | Not Available | Positive | 2987357 - 2991757 | 168760.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12590 | Not Available | Positive | 2991923 - 2992802 | 31908.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12595 | Not Available | Positive | 2992832 - 2996286 | 125020.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS12600 | Not Available | Positive | 2996307 - 2998316 | 75993.3 |
| polysaccharide lyase | BvMPK_RS12605 | Not Available | Positive | 2998483 - 3000216 | 64367.8 |
| duf3826 domain-containing protein | BvMPK_RS12610 | Not Available | Positive | 3000241 - 3000909 | 25071.4 |
| polysaccharide lyase | BvMPK_RS12615 | Not Available | Positive | 3001109 - 3002791 | 61297.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12620 | Not Available | Positive | 3002793 - 3005877 | 110123.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

