Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | BvMPK_RS12525 | Not Available | Positive | 2969556 - 2970404 | 31339.6 |
| aspartate 1-decarboxylase | BvMPK_RS12530 | Not Available | Positive | 2970426 - 2970776 | 12822.7 |
| transposase | BvMPK_RS12535 | Not Available | Negative | 2971023 - 2972381 | 52906.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12540 | Not Available | Negative | 2972596 - 2974595 | 72291.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12545 | Not Available | Negative | 2974605 - 2976265 | 58569.4 |
| nad(+) diphosphatase | BvMPK_RS12550 | Not Available | Negative | 2976342 - 2977139 | 30147.3 |
| tex family protein | BvMPK_RS12555 | Not Available | Negative | 2977162 - 2979291 | 79654.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12560 | Not Available | Positive | 2979666 - 2980509 | 32651.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12565 | Not Available | Positive | 2980840 - 2982041 | 44720.1 |
| abi family protein | BvMPK_RS12570 | Not Available | Negative | 2982383 - 2983345 | 37634.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

