Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | BvMPK_RS01260 | Not Available | Negative | 327542 - 328486 | 35903.4 |
| rna polymerase sigma-70 factor | BvMPK_RS01265 | Not Available | Negative | 328606 - 329193 | 22839.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01270 | Not Available | Negative | 329275 - 329555 | 10580.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01275 | Not Available | Negative | 329679 - 331081 | 51426.9 |
| hu family dna-binding protein | BvMPK_RS01280 | Not Available | Positive | 331398 - 332078 | 25970.1 |
| rna polymerase sigma-70 factor | BvMPK_RS01285 | Not Available | Negative | 332271 - 332837 | 22251.9 |
| fecr family protein | BvMPK_RS01290 | Not Available | Positive | 332981 - 333994 | 38552.0 |
| tonb-dependent receptor | BvMPK_RS01295 | Not Available | Positive | 334248 - 337613 | 124292.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01300 | Not Available | Positive | 337626 - 339250 | 58731.6 |
| sulfatase-like hydrolase/transferase | BvMPK_RS01305 | Not Available | Positive | 339268 - 340683 | 53071.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

