Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | BvMPK_RS12385 | Not Available | Positive | 2939872 - 2940927 | 40176.1 |
| lyttr family dna-binding domain-containing protein | BvMPK_RS12390 | Not Available | Positive | 2940924 - 2941649 | 27838.9 |
| tspo/mbr family protein | BvMPK_RS12395 | Not Available | Positive | 2941934 - 2942398 | 18163.9 |
| hemerythrin domain-containing protein | BvMPK_RS12400 | Not Available | Positive | 2942524 - 2943219 | 27016.5 |
| response regulator transcription factor | BvMPK_RS12405 | Not Available | Positive | 2943216 - 2943827 | 22691.8 |
| (fe-s)-binding protein | BvMPK_RS12410 | Not Available | Positive | 2944139 - 2944879 | 27278.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12415 | Not Available | Positive | 2944876 - 2946242 | 51023.2 |
| lud domain-containing protein | BvMPK_RS12420 | Not Available | Positive | 2946246 - 2946833 | 21719.2 |
| pyruvate formate-lyase-activating protein | BvMPK_RS12425 | Not Available | Negative | 2946935 - 2947663 | 27977.5 |
| formate c-acetyltransferase | BvMPK_RS12430 | Not Available | Negative | 2947732 - 2949960 | 84089.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

