Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS12190 | Not Available | Positive | 2896826 - 2898042 | 44548.4 |
| dna alkylation repair protein | BvMPK_RS12195 | Not Available | Negative | 2898147 - 2898863 | 28303.2 |
| gnat family n-acetyltransferase | BvMPK_RS12200 | Not Available | Negative | 2898884 - 2899381 | 19247.4 |
| padr family transcriptional regulator | BvMPK_RS12205 | Not Available | Positive | 2899558 - 2899884 | 12456.0 |
| pspc domain-containing protein | BvMPK_RS12210 | Not Available | Positive | 2899897 - 2900943 | 38246.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12215 | Not Available | Positive | 2901041 - 2902209 | 43101.9 |
| rhomboid family intramembrane serine protease | BvMPK_RS12220 | Not Available | Negative | 2902692 - 2903357 | 25210.0 |
| glycogen debranching enzyme n-terminal domain-containing protein | BvMPK_RS12225 | Not Available | Positive | 2903538 - 2905478 | 74889.3 |
| glycosyltransferase | BvMPK_RS12230 | Not Available | Positive | 2905493 - 2906758 | 47628.2 |
| glycoside hydrolase family 57 protein | BvMPK_RS12235 | Not Available | Positive | 2906777 - 2908189 | 53776.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

