Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS12040 | Not Available | Negative | 2855753 - 2858889 | 113888.0 |
| helix-turn-helix domain-containing protein | BvMPK_RS12045 | Not Available | Positive | 2859227 - 2860063 | 32684.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12050 | Not Available | Positive | 2860156 - 2860745 | 21954.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12055 | Not Available | Positive | 2861067 - 2862588 | 53996.5 |
| rna polymerase sigma factor rpod/siga | BvMPK_RS12060 | Not Available | Positive | 2862828 - 2863688 | 32805.3 |
| hypothetical protein | BvMPK_RS12065 | Not Available | Positive | 2863910 - 2864305 | 15100.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12070 | Not Available | Positive | 2864316 - 2865575 | 46681.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12075 | Not Available | Negative | 2865559 - 2865956 | 14667.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS12080 | Not Available | Positive | 2866059 - 2867308 | 45415.7 |
| potassium/proton antiporter | BvMPK_RS12085 | Not Available | Negative | 2867385 - 2868833 | 52867.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

