Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 105 protein | BvMPK_RS01210 | Not Available | Positive | 304891 - 306297 | 53401.7 |
| aldehyde dehydrogenase | BvMPK_RS01215 | Not Available | Negative | 306504 - 307940 | 52581.3 |
| duf2264 domain-containing protein | BvMPK_RS01220 | Not Available | Negative | 308356 - 309585 | 46619.4 |
| glycoside hydrolase family 88 protein | BvMPK_RS01225 | Not Available | Negative | 309575 - 310774 | 45922.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01230 | Not Available | Negative | 310820 - 313797 | 110124.0 |
| two-component regulator propeller domain-containing protein | BvMPK_RS01235 | Not Available | Negative | 313919 - 316705 | 106129.0 |
| family 78 glycoside hydrolase catalytic domain | BvMPK_RS01240 | Not Available | Negative | 316857 - 319073 | 84179.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01245 | Not Available | Negative | 319084 - 321560 | 91096.2 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS01250 | Not Available | Negative | 321778 - 323829 | 78080.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01255 | Not Available | Negative | 323842 - 327388 | 128886.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

