Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS11810 | Not Available | Positive | 2787757 - 2789191 | 53631.5 |
| tonb-dependent receptor | BvMPK_RS11815 | Not Available | Positive | 2789408 - 2792482 | 113198.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS11820 | Not Available | Positive | 2792508 - 2794006 | 55078.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS11825 | Not Available | Positive | 2794136 - 2797305 | 120850.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS11830 | Not Available | Positive | 2797396 - 2800225 | 103056.0 |
| glycosyl hydrolase | BvMPK_RS11835 | Not Available | Positive | 2800373 - 2803603 | 121396.0 |
| sialate o-acetylesterase | BvMPK_RS11840 | Not Available | Positive | 2803621 - 2805045 | 53405.0 |
| duf5703 domain-containing protein | BvMPK_RS11845 | Not Available | Positive | 2805058 - 2807289 | 85680.7 |
| linear amide c-n hydrolase | BvMPK_RS11850 | Not Available | Positive | 2807503 - 2808582 | 39662.6 |
| Trna-lys | Not Available | Not Available | Positive | 2808754 - 2808829 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

