Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxy-d-glucuronate isomerase | BvMPK_RS01160 | Not Available | Positive | 283952 - 284908 | 35966.2 |
| mfs transporter | BvMPK_RS01165 | Not Available | Positive | 285128 - 286603 | 54265.1 |
| dead/deah box helicase | BvMPK_RS01170 | Not Available | Negative | 286657 - 289983 | 128311.0 |
| hypothetical protein | BvMPK_RS01175 | Not Available | Negative | 290008 - 290745 | 27873.3 |
| glycoside hydrolase family 140 protein | BvMPK_RS01180 | Not Available | Negative | 290842 - 292305 | 55566.9 |
| glycoside hydrolase family 43 protein | BvMPK_RS01185 | Not Available | Negative | 292375 - 293379 | 38245.8 |
| two-component regulator propeller domain-containing protein | BvMPK_RS01190 | Not Available | Negative | 293494 - 297771 | 163395.0 |
| is110 family transposase | BvMPK_RS01195 | Not Available | Positive | 297936 - 299138 | 45885.7 |
| tonb-dependent receptor | BvMPK_RS01200 | Not Available | Positive | 299633 - 302803 | 118015.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01205 | Not Available | Positive | 302827 - 304825 | 73337.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

