Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family transposase | BvMPK_RS11335 | Not Available | Positive | 2673403 - 2674968 | 60533.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22620 | Not Available | Negative | 2675169 - 2675335 | 6024.98 |
| helix-turn-helix transcriptional regulator | BvMPK_RS11340 | Not Available | Negative | 2675357 - 2676630 | 46621.5 |
| spoiid/lytb domain-containing protein | BvMPK_RS11345 | Not Available | Negative | 2676688 - 2678004 | 49960.9 |
| duf4922 domain-containing protein | BvMPK_RS11350 | Not Available | Negative | 2678061 - 2680532 | 94583.3 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | BvMPK_RS11355 | Not Available | Positive | 2680619 - 2681668 | 39446.9 |
| duf4837 family protein | BvMPK_RS11360 | Not Available | Positive | 2681694 - 2682758 | 40590.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | BvMPK_RS11365 | Not Available | Positive | 2682785 - 2683885 | 40647.4 |
| sugar phosphate nucleotidyltransferase | BvMPK_RS11370 | Not Available | Positive | 2683927 - 2684637 | 26296.6 |
| hypothetical protein | BvMPK_RS11375 | Not Available | Positive | 2684657 - 2685508 | 31806.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

