Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | BvMPK_RS11125 | Not Available | Positive | 2633104 - 2633664 | 22141.5 |
| hypothetical protein | BvMPK_RS22610 | Not Available | Negative | 2633810 - 2634259 | 16593.2 |
| hypothetical protein | BvMPK_RS21965 | Not Available | Negative | 2634232 - 2634417 | 6862.41 |
| helix-turn-helix domain-containing protein | BvMPK_RS11135 | Not Available | Negative | 2634613 - 2634936 | 12499.9 |
| helix-turn-helix domain-containing protein | BvMPK_RS11140 | Not Available | Negative | 2634980 - 2635291 | 12121.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21970 | Not Available | Positive | 2635769 - 2636271 | 17996.1 |
| plasmid mobilization protein | BvMPK_RS11150 | Not Available | Positive | 2636502 - 2636873 | 13619.8 |
| relaxase/mobilization nuclease domain-containing protein | BvMPK_RS11155 | Not Available | Positive | 2636848 - 2637798 | 36132.2 |
| hypothetical protein | BvMPK_RS11160 | Not Available | Positive | 2637828 - 2638589 | 29133.1 |
| site-specific integrase | BvMPK_RS11165 | Not Available | Positive | 2638597 - 2639523 | 35871.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

