Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | BvMPK_RS10950 | Not Available | Positive | 2599455 - 2600813 | 52906.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS10955 | Not Available | Negative | 2600992 - 2601357 | 14288.8 |
| duf6249 domain-containing protein | BvMPK_RS10960 | Not Available | Positive | 2601502 - 2601942 | 16110.3 |
| valine--trna ligase | BvMPK_RS10965 | Not Available | Negative | 2602123 - 2604750 | 99817.7 |
| nucleoside triphosphate pyrophosphohydrolase | BvMPK_RS10970 | Not Available | Positive | 2604858 - 2605646 | 30701.6 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS10975 | Not Available | Negative | 2605840 - 2607570 | 65676.6 |
| tonb-dependent receptor | BvMPK_RS10980 | Not Available | Negative | 2607594 - 2610755 | 117888.0 |
| hypothetical protein | BvMPK_RS10985 | Not Available | Negative | 2611029 - 2611475 | 17649.5 |
| hypothetical protein | BvMPK_RS10990 | Not Available | Negative | 2611487 - 2611864 | 14624.4 |
| rna polymerase sigma factor | BvMPK_RS10995 | Not Available | Negative | 2611909 - 2612460 | 21616.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

