Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phoh family protein | BvMPK_RS10800 | Not Available | Negative | 2561335 - 2562339 | 37733.4 |
| duf5715 family protein | BvMPK_RS10805 | Not Available | Positive | 2562497 - 2563171 | 24792.2 |
| trna pseudouridine(38-40) synthase trua | BvMPK_RS10810 | Not Available | Positive | 2563176 - 2563979 | 30885.8 |
| tigr03915 family putative dna repair protein | BvMPK_RS10815 | Not Available | Negative | 2563945 - 2564712 | 30524.9 |
| putative dna modification/repair radical sam protein | BvMPK_RS10820 | Not Available | Negative | 2564709 - 2565977 | 48564.8 |
| tlpa disulfide reductase family protein | BvMPK_RS10825 | Not Available | Positive | 2566334 - 2567674 | 51236.8 |
| susc/raga family tonb-linked outer membrane protein | BvMPK_RS10830 | Not Available | Positive | 2567704 - 2570985 | 123217.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS10835 | Not Available | Positive | 2570998 - 2572440 | 54946.9 |
| peptidylprolyl isomerase | BvMPK_RS10840 | Not Available | Negative | 2572588 - 2573166 | 21017.5 |
| hypothetical protein | BvMPK_RS10845 | Not Available | Positive | 2573522 - 2573896 | 14035.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

