Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | BvMPK_RS01060 | Not Available | Negative | 241825 - 242559 | 27025.3 |
| two-component regulator propeller domain-containing protein | BvMPK_RS01065 | Not Available | Negative | 242755 - 247155 | 169253.0 |
| pectinesterase family protein | BvMPK_RS01070 | Not Available | Negative | 247351 - 249078 | 64096.8 |
| dienelactone hydrolase family protein | BvMPK_RS01075 | Not Available | Negative | 249085 - 250245 | 43448.3 |
| pectate lyase | BvMPK_RS01080 | Not Available | Negative | 250266 - 251879 | 61374.3 |
| cupin domain-containing protein | BvMPK_RS01085 | Not Available | Positive | 252068 - 252559 | 18194.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01090 | Not Available | Negative | 252653 - 254651 | 70944.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01095 | Not Available | Negative | 254669 - 257052 | 89154.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01100 | Not Available | Negative | 257074 - 260430 | 126387.0 |
| hypothetical protein | BvMPK_RS01105 | Not Available | Negative | 260470 - 263016 | 95138.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

