Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS10405 | Not Available | Negative | 2474968 - 2476482 | 56866.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS10410 | Not Available | Negative | 2476501 - 2479888 | 121756.0 |
| fecr family protein | BvMPK_RS10415 | Not Available | Negative | 2479904 - 2481073 | 44559.6 |
| rna polymerase sigma-70 factor | BvMPK_RS10420 | Not Available | Negative | 2481177 - 2481728 | 21576.8 |
| endonuclease muts2 | BvMPK_RS10425 | Not Available | Negative | 2481808 - 2484318 | 95359.8 |
| Trna-ser | Not Available | Not Available | Positive | 2484467 - 2484551 | Not Available |
| helix-turn-helix transcriptional regulator | BvMPK_RS10435 | Not Available | Positive | 2484792 - 2486011 | 47578.1 |
| hypothetical protein | BvMPK_RS10445 | Not Available | Negative | 2486521 - 2487909 | 54594.2 |
| hypothetical protein | BvMPK_RS10450 | Not Available | Negative | 2488320 - 2488478 | 6006.21 |
| hypothetical protein | BvMPK_RS10455 | Not Available | Positive | 2488736 - 2488984 | 9593.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

