Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS10305 | Not Available | Positive | 2448064 - 2449880 | 68136.6 |
| susc/raga family tonb-linked outer membrane protein | BvMPK_RS10310 | Not Available | Positive | 2450072 - 2453323 | 121802.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS10315 | Not Available | Positive | 2453335 - 2454756 | 53338.2 |
| tlpa disulfide reductase family protein | BvMPK_RS10320 | Not Available | Positive | 2454775 - 2455956 | 43778.7 |
| transposase | BvMPK_RS10325 | Not Available | Negative | 2456258 - 2457241 | 37569.8 |
| hypothetical protein | BvMPK_RS10330 | Not Available | Negative | 2457207 - 2457587 | 14717.3 |
| Trna-glu | Not Available | Not Available | Positive | 2457730 - 2457804 | Not Available |
| dcap family trimeric outer membrane transporter | BvMPK_RS10340 | Not Available | Positive | 2457947 - 2459236 | 48065.4 |
| deoxyribonuclease iv | BvMPK_RS10345 | Not Available | Positive | 2459279 - 2460115 | 31415.4 |
| hypothetical protein | BvMPK_RS10355 | Not Available | Negative | 2460594 - 2462666 | 78324.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

