Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | BvMPK_RS10060 | Not Available | Positive | 2391460 - 2392716 | 48292.5 |
| is21-like element helper atpase istb | BvMPK_RS10065 | Not Available | Negative | 2392816 - 2393571 | 28940.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS10070 | Not Available | Negative | 2393583 - 2395179 | 60070.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS10075 | Not Available | Negative | 2395280 - 2397208 | 73315.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS10080 | Not Available | Negative | 2397217 - 2397453 | 8847.73 |
| s8 family peptidase | BvMPK_RS10085 | Not Available | Positive | 2397804 - 2400389 | 98123.1 |
| aaa family atpase | BvMPK_RS10090 | Not Available | Negative | 2400419 - 2401408 | 38156.9 |
| hypothetical protein | BvMPK_RS10095 | Not Available | Negative | 2401603 - 2402358 | 29584.6 |
| site-specific integrase | BvMPK_RS10100 | Not Available | Positive | 2402909 - 2403844 | 36310.9 |
| upxy family transcription antiterminator | BvMPK_RS10105 | Not Available | Positive | 2404134 - 2404784 | 24605.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

