Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4923 family protein | BvMPK_RS10015 | Not Available | Positive | 2380940 - 2381536 | 21522.2 |
| transposase | BvMPK_RS10020 | Not Available | Positive | 2381879 - 2383237 | 52906.8 |
| recombinase reca | BvMPK_RS10025 | Not Available | Negative | 2383421 - 2384464 | 37366.7 |
| thioredoxin-dependent thiol peroxidase | BvMPK_RS10030 | Not Available | Negative | 2384477 - 2384923 | 16924.4 |
| saccharopine dehydrogenase family protein | BvMPK_RS10035 | Not Available | Negative | 2384991 - 2386184 | 44966.5 |
| hypothetical protein | BvMPK_RS10040 | Not Available | Negative | 2386268 - 2387521 | 47815.2 |
| meta domain-containing protein | BvMPK_RS10045 | Not Available | Positive | 2387646 - 2388437 | 28666.9 |
| molecular chaperone dnak | BvMPK_RS10050 | Not Available | Positive | 2388766 - 2390685 | 68429.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22585 | Not Available | Negative | 2390709 - 2390815 | 4037.98 |
| helix-turn-helix domain-containing protein | BvMPK_RS10055 | Not Available | Positive | 2390903 - 2391463 | 21680.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

