Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh peroxidase | BvMPK_RS09970 | Not Available | Positive | 2373969 - 2374520 | 20566.4 |
| thioredoxin | BvMPK_RS09975 | Not Available | Negative | 2374623 - 2375081 | 16986.9 |
| thioredoxin | BvMPK_RS09980 | Not Available | Negative | 2375085 - 2375381 | 11331.9 |
| omph family outer membrane protein | BvMPK_RS09985 | Not Available | Negative | 2375500 - 2376114 | 23085.3 |
| hypothetical protein | BvMPK_RS09990 | Not Available | Negative | 2376137 - 2376364 | 8190.17 |
| aminoacyl-histidine dipeptidase | BvMPK_RS09995 | Not Available | Positive | 2376586 - 2378043 | 53122.6 |
| endonuclease | BvMPK_RS10000 | Not Available | Positive | 2378049 - 2379059 | 38255.8 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | BvMPK_RS10005 | Not Available | Negative | 2379136 - 2379609 | 18355.5 |
| carboxylating nicotinate-nucleotide diphosphorylase | BvMPK_RS10010 | Not Available | Positive | 2379690 - 2380541 | 31272.2 |
| helix-turn-helix domain-containing protein | BvMPK_RS21910 | Not Available | Negative | 2380656 - 2380778 | 4640.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

