Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BvMPK_RS09820 | Not Available | Positive | 2341877 - 2343121 | 47829.8 |
| tolc family protein | BvMPK_RS09825 | Not Available | Positive | 2343275 - 2344759 | 56980.8 |
| sigma-54 dependent transcriptional regulator | BvMPK_RS09830 | Not Available | Positive | 2344845 - 2346200 | 50708.5 |
| pas domain-containing sensor histidine kinase | BvMPK_RS09835 | Not Available | Positive | 2346223 - 2347518 | 49040.2 |
| atp-binding protein | BvMPK_RS09840 | Not Available | Positive | 2347766 - 2349328 | 60445.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22575 | Not Available | Positive | 2350481 - 2350754 | 9708.61 |
| upxy family transcription antiterminator | BvMPK_RS09850 | Not Available | Positive | 2350891 - 2351439 | 21037.2 |
| hypothetical protein | BvMPK_RS09855 | Not Available | Positive | 2351533 - 2351910 | 14505.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS09860 | Not Available | Positive | 2351939 - 2353344 | 50173.3 |
| hypothetical protein | BvMPK_RS09865 | Not Available | Positive | 2353363 - 2354076 | 27767.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

