Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS09720 | Not Available | Negative | 2324466 - 2324978 | 20181.3 |
| transposase | BvMPK_RS09725 | Not Available | Negative | 2325003 - 2325986 | 37569.8 |
| hypothetical protein | BvMPK_RS09730 | Not Available | Negative | 2325952 - 2326356 | 15659.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS09735 | Not Available | Negative | 2326398 - 2326943 | 20633.9 |
| cytidine deaminase | BvMPK_RS09740 | Not Available | Negative | 2326940 - 2327419 | 17702.2 |
| heavy metal-binding domain-containing protein | BvMPK_RS09745 | Not Available | Positive | 2327638 - 2327961 | 11453.6 |
| duf4476 domain-containing protein | BvMPK_RS09750 | Not Available | Negative | 2328031 - 2328642 | 22961.6 |
| duf4476 domain-containing protein | BvMPK_RS09755 | Not Available | Negative | 2328676 - 2329347 | 25461.8 |
| rna polymerase sigma factor | BvMPK_RS09760 | Not Available | Positive | 2329655 - 2330191 | 21672.0 |
| hypothetical protein | BvMPK_RS09765 | Not Available | Positive | 2330199 - 2330561 | 13705.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

