Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | BvMPK_RS09620 | Not Available | Negative | 2300259 - 2301341 | 39202.6 |
| 4fe-4s dicluster-binding protein | BvMPK_RS09625 | Not Available | Negative | 2301353 - 2301583 | 8117.04 |
| tol-pal system ybgf family protein | BvMPK_RS09630 | Not Available | Negative | 2301594 - 2301890 | 11531.6 |
| duf4468 domain-containing protein | BvMPK_RS09635 | Not Available | Negative | 2302255 - 2303352 | 40449.4 |
| ribose 5-phosphate isomerase b | BvMPK_RS09640 | Not Available | Negative | 2303458 - 2303892 | 15944.1 |
| transketolase | BvMPK_RS09645 | Not Available | Negative | 2303889 - 2305901 | 72436.4 |
| xylulokinase | BvMPK_RS09650 | Not Available | Negative | 2306036 - 2307634 | 57774.1 |
| l-arabinose isomerase | BvMPK_RS09655 | Not Available | Negative | 2307737 - 2309266 | 57229.3 |
| l-ribulose-5-phosphate 4-epimerase | BvMPK_RS09660 | Not Available | Negative | 2309306 - 2309992 | 24994.8 |
| nrtr dna-binding winged helix domain-containing protein | BvMPK_RS09665 | Not Available | Negative | 2310063 - 2310740 | 26233.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

