Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21 family transposase | BvMPK_RS09230 | Not Available | Negative | 2212950 - 2214524 | 62105.4 |
| hypothetical protein | BvMPK_RS21890 | Not Available | Positive | 2215184 - 2215405 | 8728.56 |
| helix-turn-helix transcriptional regulator | BvMPK_RS09240 | Not Available | Positive | 2215881 - 2216371 | 18958.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS09245 | Not Available | Positive | 2216362 - 2216560 | 7979.04 |
| duf5712 family protein | BvMPK_RS09250 | Not Available | Positive | 2216740 - 2217675 | 36546.9 |
| type iv secretory system conjugative dna transfer family protein | BvMPK_RS09255 | Not Available | Positive | 2217690 - 2219312 | 61104.6 |
| transposase | BvMPK_RS09260 | Not Available | Positive | 2219457 - 2219699 | 9349.64 |
| rna polymerase sigma-70 factor | BvMPK_RS09265 | Not Available | Positive | 2219901 - 2220461 | 21746.7 |
| fecr family protein | BvMPK_RS09270 | Not Available | Positive | 2220507 - 2221541 | 40070.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS09275 | Not Available | Positive | 2221643 - 2224935 | 119916.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

