Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trag family conjugative transposon atpase | BvMPK_RS00905 | Not Available | Negative | 200898 - 203435 | 97679.3 |
| duf4133 domain-containing protein | BvMPK_RS00910 | Not Available | Negative | 203432 - 203758 | 12291.5 |
| duf4134 domain-containing protein | BvMPK_RS21430 | Not Available | Negative | 203763 - 204059 | 10410.8 |
| duf262 domain-containing protein | BvMPK_RS00920 | Not Available | Positive | 204387 - 205442 | 41341.6 |
| duf3696 domain-containing protein | BvMPK_RS00925 | Not Available | Positive | 205595 - 206572 | 36617.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00935 | Not Available | Negative | 207319 - 207708 | 15189.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00940 | Not Available | Positive | 208240 - 212223 | 149777.0 |
| susc/raga family tonb-linked outer membrane protein | BvMPK_RS00945 | Not Available | Positive | 212601 - 215046 | 91807.2 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS00950 | Not Available | Positive | 215075 - 216550 | 54862.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00955 | Not Available | Negative | 216700 - 217390 | 26858.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

