Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS08535 | Not Available | Positive | 2045084 - 2045263 | 6941.97 |
| duf4248 domain-containing protein | BvMPK_RS08540 | Not Available | Negative | 2045372 - 2045611 | 9222.05 |
| hu family dna-binding protein | BvMPK_RS08545 | Not Available | Positive | 2045891 - 2046364 | 16847.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21855 | Not Available | Positive | 2046514 - 2046915 | 15060.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS08555 | Not Available | Negative | 2046946 - 2047215 | 10107.0 |
| is66 family transposase | BvMPK_RS08560 | Not Available | Negative | 2047309 - 2049102 | 69334.1 |
| is66 family insertion sequence element accessory protein tnpb | BvMPK_RS08565 | Not Available | Negative | 2049175 - 2049510 | 13408.5 |
| hypothetical protein | BvMPK_RS21860 | Not Available | Positive | 2049645 - 2049875 | 8927.22 |
| hypothetical protein | BvMPK_RS08575 | Not Available | Negative | 2050241 - 2051755 | 57156.5 |
| aldo/keto reductase | BvMPK_RS08580 | Not Available | Negative | 2051887 - 2052804 | 35317.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

