Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s46 family peptidase | BvMPK_RS08460 | Not Available | Negative | 2023367 - 2025493 | 80045.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS08465 | Not Available | Negative | 2025498 - 2026858 | 50080.3 |
| lipopolysaccharide biosynthesis protein | BvMPK_RS08470 | Not Available | Negative | 2026861 - 2028306 | 54344.9 |
| holliday junction branch migration dna helicase ruvb | BvMPK_RS08475 | Not Available | Negative | 2028310 - 2029338 | 38022.6 |
| site-specific integrase | BvMPK_RS08480 | Not Available | Positive | 2029465 - 2030583 | 43299.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22555 | Not Available | Positive | 2030664 - 2030730 | 2517.88 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22560 | Not Available | Negative | 2030831 - 2030919 | 3312.87 |
| atp-binding protein | BvMPK_RS08485 | Not Available | Positive | 2031140 - 2032462 | 51528.5 |
| hypothetical protein | BvMPK_RS08490 | Not Available | Negative | 2032913 - 2033161 | 9646.03 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21835 | Not Available | Positive | 2033067 - 2033353 | 10059.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

