Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix dna-binding protein | BvMPK_RS08365 | Not Available | Negative | 2007694 - 2008062 | 14060.4 |
| thioredoxin | BvMPK_RS08370 | Not Available | Negative | 2008100 - 2008579 | 17688.5 |
| duf6132 family protein | BvMPK_RS08375 | Not Available | Negative | 2008582 - 2008800 | 8004.92 |
| hypothetical protein | BvMPK_RS08380 | Not Available | Negative | 2009003 - 2009251 | 9253.75 |
| outer membrane beta-barrel protein | BvMPK_RS08385 | Not Available | Positive | 2009431 - 2010078 | 24488.9 |
| hypothetical protein | BvMPK_RS08390 | Not Available | Positive | 2010091 - 2010588 | 18619.9 |
| glycoside hydrolase family 105 protein | BvMPK_RS08395 | Not Available | Negative | 2010646 - 2011944 | 49892.6 |
| nucleotidyl transferase abieii/abigii toxin family protein | BvMPK_RS08400 | Not Available | Positive | 2012278 - 2012481 | 7696.4 |
| Trna-met | Not Available | Not Available | Positive | 2012591 - 2012667 | Not Available |
| helix-turn-helix transcriptional regulator | BvMPK_RS08410 | Not Available | Positive | 2012823 - 2015450 | 96370.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

