Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BvMPK_RS08225 | Not Available | Negative | 1975117 - 1975596 | 18338.9 |
| rna polymerase sigma factor | BvMPK_RS08230 | Not Available | Negative | 1975586 - 1976095 | 20158.2 |
| acetylglutamate kinase | BvMPK_RS08235 | Not Available | Negative | 1976159 - 1976932 | 27177.1 |
| biosynthetic arginine decarboxylase | BvMPK_RS08240 | Not Available | Negative | 1976937 - 1978829 | 71492.0 |
| shikimate kinase | BvMPK_RS08245 | Not Available | Negative | 1978871 - 1979398 | 20453.7 |
| type i dna topoisomerase | BvMPK_RS08250 | Not Available | Negative | 1979395 - 1981833 | 91403.2 |
| tonb-dependent receptor | BvMPK_RS08255 | Not Available | Negative | 1981955 - 1983652 | 64322.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS08260 | Not Available | Negative | 1983676 - 1986577 | 106045.0 |
| nudix domain-containing protein | BvMPK_RS08265 | Not Available | Negative | 1986587 - 1987111 | 19830.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS08270 | Not Available | Positive | 1987246 - 1988431 | 44005.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

