Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | BvMPK_RS08125 | Not Available | Negative | 1952425 - 1953639 | 45098.1 |
| fe-s cluster assembly protein sufd | BvMPK_RS08130 | Not Available | Negative | 1953646 - 1954989 | 50473.4 |
| fe-s cluster assembly atpase sufc | BvMPK_RS08135 | Not Available | Negative | 1955019 - 1955771 | 27654.6 |
| fe-s cluster assembly protein sufb | BvMPK_RS08140 | Not Available | Negative | 1955799 - 1957250 | 54039.0 |
| cvpa family protein | BvMPK_RS08145 | Not Available | Negative | 1957258 - 1957761 | 18078.1 |
| translation initiation factor if-2 | BvMPK_RS08150 | Not Available | Negative | 1957900 - 1960911 | 111115.0 |
| transcription termination factor nusa | BvMPK_RS08155 | Not Available | Negative | 1960953 - 1962209 | 47697.0 |
| ribosome assembly cofactor rimp | BvMPK_RS08160 | Not Available | Negative | 1962212 - 1962679 | 17916.3 |
| hypothetical protein | BvMPK_RS08165 | Not Available | Positive | 1962818 - 1963237 | 15775.0 |
| mfs transporter araj | BvMPK_RS08170 | Not Available | Negative | 1963198 - 1964358 | 41260.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

