Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS08025 | Not Available | Positive | 1925548 - 1926689 | 41202.1 |
| porv/porq family protein | BvMPK_RS08030 | Not Available | Negative | 1926786 - 1927766 | 35213.9 |
| s8 family serine peptidase | BvMPK_RS08035 | Not Available | Negative | 1927789 - 1929645 | 67259.1 |
| porin | BvMPK_RS08040 | Not Available | Negative | 1929913 - 1931100 | 44355.6 |
| duf3109 family protein | BvMPK_RS08045 | Not Available | Negative | 1931167 - 1931748 | 22097.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | BvMPK_RS08050 | Not Available | Negative | 1931851 - 1933365 | 55851.1 |
| hypothetical protein | BvMPK_RS21815 | Not Available | Positive | 1933432 - 1933635 | 7319.03 |
| gntr family transcriptional regulator | BvMPK_RS08055 | Not Available | Positive | 1933811 - 1934791 | 38069.7 |
| l-fucose isomerase | BvMPK_RS08060 | Not Available | Positive | 1934813 - 1936588 | 65624.0 |
| l-fucose:h+ symporter permease | BvMPK_RS08065 | Not Available | Positive | 1936701 - 1938014 | 48425.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

