Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | BvMPK_RS07940 | Not Available | Positive | 1896418 - 1896672 | 9698.07 |
| transposase family protein | BvMPK_RS07945 | Not Available | Positive | 1896868 - 1897251 | 14632.6 |
| transposase | BvMPK_RS07950 | Not Available | Positive | 1897280 - 1898215 | 36125.3 |
| dna topoisomerase (atp-hydrolyzing) subunit b | BvMPK_RS07955 | Not Available | Positive | 1898572 - 1900536 | 72969.4 |
| 4-alpha-glucanotransferase | BvMPK_RS07960 | Not Available | Positive | 1900864 - 1903542 | 104474.0 |
| mfs transporter | BvMPK_RS07965 | Not Available | Positive | 1903616 - 1904971 | 49044.2 |
| arac family transcriptional regulator | BvMPK_RS07970 | Not Available | Positive | 1905677 - 1906162 | 19011.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS07975 | Not Available | Positive | 1906235 - 1908721 | 89522.6 |
| hypothetical protein | BvMPK_RS21800 | Not Available | Positive | 1908861 - 1909106 | 9481.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21805 | Not Available | Positive | 1909034 - 1909233 | 7499.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

