Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | BvMPK_RS07470 | Not Available | Negative | 1801434 - 1801904 | 18125.9 |
| site-specific integrase | BvMPK_RS07475 | Not Available | Positive | 1801873 - 1802475 | 22624.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS07480 | Not Available | Positive | 1802501 - 1803642 | 40236.0 |
| marr family winged helix-turn-helix transcriptional regulator | BvMPK_RS07485 | Not Available | Negative | 1803859 - 1804305 | 17085.9 |
| duf169 domain-containing protein | BvMPK_RS07490 | Not Available | Positive | 1804405 - 1805121 | 27228.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22545 | Not Available | Positive | 1805120 - 1805224 | 4168.07 |
| fic family protein | BvMPK_RS07495 | Not Available | Negative | 1805524 - 1806333 | 30839.3 |
| site-specific integrase | BvMPK_RS07500 | Not Available | Positive | 1806710 - 1808047 | 52967.9 |
| tigr04255 family protein | BvMPK_RS07505 | Not Available | Positive | 1808136 - 1808873 | 28398.3 |
| hypothetical protein | BvMPK_RS07510 | Not Available | Positive | 1808866 - 1809207 | 12865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

