Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanz family protein | BvMPK_RS07230 | Not Available | Positive | 1750017 - 1750403 | 14804.4 |
| rna polymerase sigma factor | BvMPK_RS07235 | Not Available | Negative | 1750484 - 1750987 | 19779.6 |
| tonb-dependent receptor | BvMPK_RS07240 | Not Available | Negative | 1751156 - 1753630 | 91585.5 |
| cyth domain-containing protein | BvMPK_RS07245 | Not Available | Negative | 1753720 - 1754190 | 18287.6 |
| peptide chain release factor 2 | BvMPK_RS07255 | Not Available | Negative | 1754485 - 1755600 | 42519.2 |
| long-chain fatty acid--coa ligase | BvMPK_RS07260 | Not Available | Negative | 1755658 - 1757463 | 68368.2 |
| m20 family metallo-hydrolase | BvMPK_RS07265 | Not Available | Positive | 1757677 - 1758741 | 39152.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS07270 | Not Available | Negative | 1758747 - 1759123 | 13260.9 |
| polysaccharide biosynthesis protein | BvMPK_RS07275 | Not Available | Negative | 1759230 - 1760072 | 31359.2 |
| nudix domain-containing protein | BvMPK_RS07280 | Not Available | Negative | 1760080 - 1760970 | 34168.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

