Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prtrc system protein e | BvMPK_RS06940 | Not Available | Positive | 1693622 - 1694701 | 40160.3 |
| prtrc system protein c | BvMPK_RS06945 | Not Available | Positive | 1694723 - 1694944 | 8397.02 |
| hypothetical protein | BvMPK_RS06950 | Not Available | Positive | 1694987 - 1696096 | 43633.2 |
| prokaryotic e2 ligase family d protein | BvMPK_RS06955 | Not Available | Positive | 1696136 - 1696837 | 27043.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06960 | Not Available | Positive | 1696834 - 1697624 | 29750.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06965 | Not Available | Negative | 1697857 - 1698554 | 26117.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06970 | Not Available | Negative | 1698613 - 1698905 | 11172.9 |
| phosphoribosyltransferase | BvMPK_RS06975 | Not Available | Negative | 1699166 - 1699984 | 31326.1 |
| helix-turn-helix domain-containing protein | BvMPK_RS06980 | Not Available | Positive | 1700256 - 1700540 | 11187.8 |
| helix-turn-helix domain-containing protein | BvMPK_RS06985 | Not Available | Positive | 1700554 - 1700850 | 11473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

