Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | BvMPK_RS06885 | Not Available | Positive | 1681762 - 1682424 | 26282.7 |
| stld/darb family beta-ketosynthase | BvMPK_RS06890 | Not Available | Positive | 1682440 - 1683579 | 42660.1 |
| tetr/acrr family transcriptional regulator | BvMPK_RS06895 | Not Available | Positive | 1683828 - 1684358 | 20646.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06900 | Not Available | Positive | 1684545 - 1686887 | 85654.1 |
| sigma-54 dependent transcriptional regulator | BvMPK_RS06905 | Not Available | Positive | 1686868 - 1688196 | 49970.9 |
| duf3945 domain-containing protein | BvMPK_RS06915 | Not Available | Positive | 1688824 - 1690653 | 69327.4 |
| duf4099 domain-containing protein | BvMPK_RS06920 | Not Available | Positive | 1690715 - 1690984 | 9862.04 |
| dna topoisomerase | BvMPK_RS06925 | Not Available | Positive | 1691051 - 1692805 | 65681.3 |
| hypothetical protein | BvMPK_RS06935 | Not Available | Positive | 1693160 - 1693372 | 7805.33 |
| hypothetical protein | BvMPK_RS21730 | Not Available | Positive | 1693392 - 1693601 | 7772.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

