Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS22525 | Not Available | Negative | 1658996 - 1659067 | 2684.31 |
| atp-dependent clp protease atp-binding subunit | BvMPK_RS06800 | Not Available | Negative | 1659079 - 1661559 | 92015.7 |
| type vi secretion system tube protein tssd | BvMPK_RS06805 | Not Available | Positive | 1661839 - 1662237 | 15211.9 |
| type vi secretion system vgr family protein | BvMPK_RS06810 | Not Available | Positive | 1662357 - 1664165 | 65848.1 |
| hypothetical protein | BvMPK_RS06815 | Not Available | Positive | 1664177 - 1665535 | 52142.9 |
| hypothetical protein | BvMPK_RS06820 | Not Available | Positive | 1665581 - 1666054 | 17536.6 |
| duf5458 family protein | BvMPK_RS06825 | Not Available | Positive | 1666063 - 1667430 | 51720.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06830 | Not Available | Positive | 1667516 - 1671861 | 155147.0 |
| hypothetical protein | BvMPK_RS06835 | Not Available | Positive | 1671875 - 1672447 | 22177.5 |
| hypothetical protein | BvMPK_RS06840 | Not Available | Negative | 1672561 - 1672830 | 10804.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

