Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS22520 | Not Available | Positive | 1627203 - 1628310 | 39748.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06655 | Not Available | Positive | 1628347 - 1629121 | 27983.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06665 | Not Available | Positive | 1631012 - 1635000 | 146214.0 |
| hypothetical protein | BvMPK_RS06670 | Not Available | Negative | 1635150 - 1636184 | 36301.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06675 | Not Available | Positive | 1636587 - 1637728 | 40223.1 |
| fad-binding oxidoreductase | BvMPK_RS06680 | Not Available | Positive | 1637837 - 1639060 | 45874.3 |
| hypothetical protein | BvMPK_RS06685 | Not Available | Negative | 1639153 - 1639359 | 7914.05 |
| hypothetical protein | BvMPK_RS06690 | Not Available | Negative | 1639411 - 1639701 | 10951.2 |
| manganese catalase family protein | BvMPK_RS06695 | Not Available | Negative | 1639953 - 1640885 | 34824.1 |
| hypothetical protein | BvMPK_RS06700 | Not Available | Negative | 1640918 - 1641214 | 11601.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

