Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | BvMPK_RS06500 | Not Available | Negative | 1590721 - 1591722 | 37016.0 |
| lipopolysaccharide assembly protein lapb | BvMPK_RS06505 | Not Available | Negative | 1591782 - 1592732 | 35738.7 |
| beta-n-acetylglucosaminidase | BvMPK_RS06510 | Not Available | Negative | 1592747 - 1594960 | 84958.2 |
| atp-dependent dna helicase recq | BvMPK_RS06515 | Not Available | Negative | 1595007 - 1596902 | 72894.9 |
| single-stranded-dna-specific exonuclease recj | BvMPK_RS06520 | Not Available | Negative | 1597020 - 1598792 | 66543.5 |
| aminopeptidase c | BvMPK_RS06525 | Not Available | Negative | 1598907 - 1600118 | 45970.4 |
| aminopeptidase p family protein | BvMPK_RS06530 | Not Available | Negative | 1600147 - 1601538 | 51737.2 |
| patatin family protein | BvMPK_RS06535 | Not Available | Positive | 1601868 - 1602722 | 32936.4 |
| transposase | BvMPK_RS06540 | Not Available | Negative | 1602995 - 1604353 | 52945.9 |
| hypothetical protein | BvMPK_RS06545 | Not Available | Negative | 1604553 - 1605353 | 30027.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

