Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | BvMPK_RS06350 | Not Available | Positive | 1554039 - 1555208 | 43859.6 |
| nitroreductase family protein | BvMPK_RS06355 | Not Available | Positive | 1555320 - 1556048 | 27942.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22515 | Not Available | Negative | 1556067 - 1556252 | 7561.88 |
| gfo/idh/moca family protein | BvMPK_RS06365 | Not Available | Negative | 1556417 - 1557979 | 58071.8 |
| homoserine o-succinyltransferase | BvMPK_RS06370 | Not Available | Positive | 1558362 - 1559279 | 35746.9 |
| u32 family peptidase | BvMPK_RS06375 | Not Available | Positive | 1559276 - 1561105 | 69827.9 |
| zinc ribbon domain-containing protein | BvMPK_RS06380 | Not Available | Positive | 1561092 - 1562054 | 36802.1 |
| tonb-dependent receptor | BvMPK_RS06385 | Not Available | Negative | 1562294 - 1564720 | 92160.0 |
| response regulator transcription factor | BvMPK_RS06390 | Not Available | Negative | 1564890 - 1565510 | 23357.5 |
| nad(p)/fad-dependent oxidoreductase | BvMPK_RS06395 | Not Available | Negative | 1565638 - 1567281 | 60702.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

