Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | BvMPK_RS06300 | Not Available | Positive | 1536010 - 1536600 | 23285.1 |
| fecr family protein | BvMPK_RS06305 | Not Available | Positive | 1536671 - 1537684 | 39115.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06310 | Not Available | Positive | 1537934 - 1541252 | 119727.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS06315 | Not Available | Positive | 1541266 - 1542954 | 64144.1 |
| hypothetical protein | BvMPK_RS06320 | Not Available | Positive | 1542972 - 1544648 | 63045.8 |
| abc-f family atp-binding cassette domain-containing protein | BvMPK_RS06325 | Not Available | Positive | 1545044 - 1546987 | 73678.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06330 | Not Available | Positive | 1547037 - 1549047 | 73698.0 |
| duf6769 family protein | BvMPK_RS06335 | Not Available | Positive | 1549077 - 1549580 | 19121.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06340 | Not Available | Positive | 1549675 - 1550933 | 46675.3 |
| efflux rnd transporter permease subunit | BvMPK_RS06345 | Not Available | Positive | 1550945 - 1554028 | 112429.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

