Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | BvMPK_RS06195 | Not Available | Positive | 1507962 - 1509344 | 50049.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06200 | Not Available | Positive | 1509358 - 1509910 | 19867.5 |
| alpha-isopropylmalate synthase regulatory domain-containing protein | BvMPK_RS06205 | Not Available | Positive | 1509916 - 1511436 | 56824.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06210 | Not Available | Positive | 1511530 - 1512589 | 36150.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06215 | Not Available | Positive | 1512721 - 1513865 | 41046.9 |
| peptide-methionine (s)-s-oxide reductase msra | BvMPK_RS06220 | Not Available | Negative | 1513934 - 1514419 | 18625.0 |
| lipopolysaccharide assembly protein lapb | BvMPK_RS06225 | Not Available | Positive | 1514537 - 1515391 | 32554.4 |
| is1182 family transposase | BvMPK_RS06230 | Not Available | Negative | 1515583 - 1517094 | 59191.7 |
| dna helicase recq | BvMPK_RS06235 | Not Available | Negative | 1517259 - 1519076 | 69130.0 |
| is110 family transposase | BvMPK_RS06240 | Not Available | Positive | 1519246 - 1520448 | 45885.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

