Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS06140 | Not Available | Positive | 1495550 - 1496403 | 31374.5 |
| carboxypeptidase-like regulatory domain-containing protein | BvMPK_RS06145 | Not Available | Positive | 1496413 - 1497969 | 60100.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1499305 - 1500837 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1500970 - 1501043 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1501061 - 1501134 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1501259 - 1504151 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1504230 - 1504340 | Not Available |
| transposase family protein | BvMPK_RS06175 | Not Available | Positive | 1504510 - 1504893 | 14632.6 |
| transposase | BvMPK_RS06180 | Not Available | Positive | 1504922 - 1505857 | 36125.3 |
| 2-isopropylmalate synthase | BvMPK_RS06190 | Not Available | Positive | 1506448 - 1507944 | 54450.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

