Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oadg family protein | BvMPK_RS05995 | Not Available | Positive | 1457850 - 1458101 | 8725.21 |
| biotin/lipoyl-containing protein | BvMPK_RS06000 | Not Available | Positive | 1458132 - 1459994 | 68971.7 |
| sodium ion-translocating decarboxylase subunit beta | BvMPK_RS06005 | Not Available | Positive | 1459994 - 1461229 | 44261.9 |
| tlpa disulfide reductase family protein | BvMPK_RS06010 | Not Available | Negative | 1461425 - 1462774 | 50445.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS06015 | Not Available | Negative | 1462781 - 1463940 | 44141.5 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS06020 | Not Available | Negative | 1463959 - 1465449 | 55759.7 |
| tonb-dependent receptor | BvMPK_RS06025 | Not Available | Negative | 1465470 - 1468787 | 122594.0 |
| fecr family protein | BvMPK_RS06030 | Not Available | Negative | 1468843 - 1470003 | 44078.4 |
| rna polymerase sigma factor | BvMPK_RS06035 | Not Available | Negative | 1470070 - 1470654 | 23217.7 |
| glycoside hydrolase 43 family protein | BvMPK_RS06040 | Not Available | Negative | 1470755 - 1472419 | 61567.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

