Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1295 domain-containing protein | BvMPK_RS05945 | Not Available | Positive | 1448808 - 1449572 | 29466.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05950 | Not Available | Positive | 1449635 - 1450857 | 44442.2 |
| sdr family nad(p)-dependent oxidoreductase | BvMPK_RS05955 | Not Available | Positive | 1450854 - 1451714 | 31842.1 |
| dmt family transporter | BvMPK_RS05960 | Not Available | Negative | 1451822 - 1452748 | 33083.5 |
| aaa family atpase | BvMPK_RS05965 | Not Available | Positive | 1452831 - 1453652 | 31166.5 |
| duf4435 domain-containing protein | BvMPK_RS05970 | Not Available | Positive | 1453674 - 1454669 | 39179.5 |
| doxx family protein | BvMPK_RS05975 | Not Available | Negative | 1454675 - 1455115 | 16170.6 |
| 6-phosphofructokinase | BvMPK_RS05980 | Not Available | Positive | 1455376 - 1456356 | 35283.2 |
| had family hydrolase | BvMPK_RS05985 | Not Available | Negative | 1456366 - 1457019 | 24307.2 |
| nitroreductase family protein | BvMPK_RS05990 | Not Available | Positive | 1457082 - 1457582 | 18878.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

