Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | BvMPK_RS05845 | Not Available | Positive | 1425649 - 1426125 | 17875.6 |
| dihydrofolate reductase | BvMPK_RS05850 | Not Available | Negative | 1426129 - 1426623 | 18849.7 |
| thymidylate synthase | BvMPK_RS05855 | Not Available | Negative | 1426707 - 1427501 | 30479.3 |
| duf5056 domain-containing protein | BvMPK_RS05860 | Not Available | Negative | 1427583 - 1427912 | 12355.1 |
| rna polymerase sigma factor | BvMPK_RS05865 | Not Available | Negative | 1427896 - 1428444 | 21091.3 |
| duf6249 domain-containing protein | BvMPK_RS05870 | Not Available | Negative | 1428447 - 1429154 | 25991.5 |
| methyltransferase rsmf c-terminal domain-like protein | BvMPK_RS05875 | Not Available | Positive | 1429286 - 1430713 | 53394.1 |
| dna topoisomerase 3 | BvMPK_RS05880 | Not Available | Negative | 1430850 - 1432991 | 79806.9 |
| pepsy-like domain-containing protein | BvMPK_RS05885 | Not Available | Positive | 1433265 - 1434131 | 33212.5 |
| thioesterase family protein | BvMPK_RS05890 | Not Available | Positive | 1434363 - 1434737 | 13047.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

