Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3795 domain-containing protein | BvMPK_RS00550 | Not Available | Negative | 138202 - 138543 | 12991.7 |
| pyridoxamine 5'-phosphate oxidase family protein | BvMPK_RS00555 | Not Available | Negative | 138604 - 139017 | 15855.9 |
| m56 family metallopeptidase | BvMPK_RS00560 | Not Available | Negative | 139220 - 140578 | 51008.4 |
| blai/meci/copy family transcriptional regulator | BvMPK_RS00565 | Not Available | Negative | 140581 - 140946 | 14496.2 |
| voc family protein | BvMPK_RS00570 | Not Available | Negative | 141109 - 141474 | 13033.5 |
| efr1 family ferrodoxin | BvMPK_RS00575 | Not Available | Negative | 141568 - 142371 | 30189.7 |
| hypothetical protein | BvMPK_RS00580 | Not Available | Negative | 142368 - 142997 | 23484.1 |
| helix-turn-helix domain-containing protein | BvMPK_RS00585 | Not Available | Negative | 143027 - 143827 | 30658.1 |
| pyridoxamine 5'-phosphate oxidase family protein | BvMPK_RS00590 | Not Available | Negative | 143880 - 144299 | 16101.0 |
| zinc ribbon domain-containing protein | BvMPK_RS00595 | Not Available | Negative | 144311 - 144991 | 25798.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

