Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yran family protein | BvMPK_RS05455 | Not Available | Negative | 1344799 - 1345164 | 14153.8 |
| hypothetical protein | BvMPK_RS05460 | Not Available | Positive | 1345240 - 1345473 | 9401.63 |
| nucleoside deaminase | BvMPK_RS05465 | Not Available | Positive | 1345475 - 1345909 | 15697.1 |
| duf4834 family protein | BvMPK_RS05470 | Not Available | Negative | 1345913 - 1346215 | 11511.5 |
| phosphatidylcholine/phosphatidylserine synthase | BvMPK_RS05475 | Not Available | Negative | 1346268 - 1346975 | 26073.4 |
| phosphatidylserine decarboxylase family protein | BvMPK_RS05480 | Not Available | Negative | 1346987 - 1347673 | 25956.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05485 | Not Available | Positive | 1347865 - 1351660 | 142739.0 |
| thioredoxin | BvMPK_RS05490 | Not Available | Positive | 1351702 - 1352016 | 11469.8 |
| hypothetical protein | BvMPK_RS05495 | Not Available | Positive | 1352052 - 1352387 | 12878.8 |
| is110 family transposase | BvMPK_RS05500 | Not Available | Negative | 1352794 - 1353996 | 45885.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

